create.reactionMR Documentation

create.reactionM

Description

This function matches a mass vector against a user provided database, inside an user provided mass tolerance window.

Usage

  create.reactionM(DB, molIon, ppm.tol)

Arguments

DB

dataframe containing the mandatory fields id, formula and reactions.

molIon

list of annotations provided by get.annot function.

ppm.tol

parts per million mass tolerance allowed in the mass search.

Value

A matrix of reactions that each compound candidate, inside the mass window, can participate in the metabolism.