get.Mzmatch.annotR Documentation

get.Mzmatch.annot

Description

This function extracts annotation from mzMatch PeakML file, generating a matrix of non-redundant putative molecular ions.

Usage

  get.Mzmatch.annot(filename, onlyBP = TRUE)

Arguments

filename

PeakML file containing ion annotation.

onlyBP

logical, if TRUE retrieves only PeakML "bp" relationship, if FALSE also retrieves "potential bp" relationship.

Value

A list with a matrix of possible molecular ions with a trace of their annotation, and the used xsAnnotate object.